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Determination of Contaminants: HPLC vs. GC

HPLC und GC image
Jun 24, 2025

Gas Chromatography (GC) and High-Performance Liquid Chromatography (HPLC) are among the most important analytical methods in modern chemical analysis. Both techniques play a vital role in research as well as in industries such as food safety.

But how do they differ in terms of function, setup, and the types of substances they analyze?

Technology and Function of GC and HPLC

GC uses a gas as the mobile phase to separate non-polar substances. The sample is first vaporized in an injector and then carried by a carrier gas—stored in a dedicated gas tank—through a separation column coated with a stationary phase. This stationary phase typically consists of a high-boiling liquid or polymer applied to a solid support. A temperature gradient is applied in the GC oven, causing substances to elute based on their volatility and interaction. GC is ideal for analyzing volatile and thermally stable substances. Thermally stable substances are chemical compounds that retain their structure and properties at high temperatures without decomposing—for example, organic solvents or flavor compounds.

In contrast, HPLC uses a liquid as the mobile phase. Dissolved polar compounds are pumped under high pressure through a separation column filled with a stationary phase composed of fine particles (usually silica). Solvent gradients are applied—meaning two (or more) different solvents are used at varying ratios, e.g., starting with A 0% and B 100%, and ending with A 100% and B 0%. Separation occurs primarily based on polarity and solubility, making HPLC ideal for a wide range of samples, especially non-volatile and polar compounds such as vitamins or preservatives.

Detection Methods in GC and HPLC

GC is a reliable detection method for analyzing volatile and heat-stable substances. Using highly sensitive detectors such as the Flame Ionization Detector (FID) or Mass Spectrometry (MS), even trace amounts of pesticides or allergens can be detected.

HPLC, on the other hand, is particularly effective for analyzing highly polar and low-volatility substances such as contaminants and food additives. Thanks to various detectors, such as fluorescence or mass spectrometry, these compounds can be precisely identified and quantified.

Sensitivity and Selectivity of GC and HPLC

Differences in selectivity and resolution between gas chromatography and high-performance liquid chromatography affect the precision and reproducibility of analytical results, for instance in product quality control or safety-related testing.

GC achieves precise separation of specific substances by selecting suitable column materials and controlling parameters like temperature gradients, gas flow, and pressure. Its resolution allows for differentiation of closely related volatile components within complex mixtures.

HPLC offers greater flexibility for separating a wide variety of molecules differing in polarity and size. By using various stationary phases and tailoring the mobile phase, the method can be customized for a broad range of analytical tasks. Gradient elution enhances separation efficiency and reduces run times—especially beneficial for high-throughput applications.

Application Areas of GC and HPLC

Food Industry

In sensory food analysis, GC not only enables the detection and identification of aroma compounds but also their precise quantification—critical for production and quality control. GC is used to analyze both natural and artificial aroma components in products like beverages, baked goods, or spice blends.

HPLC is especially useful for analyzing additives, allowing for accurate quantification of vitamins, preservatives, sweeteners, and colorants. This helps the food industry comply with legal requirements and offers consumers transparency regarding product composition.

Biopharmaceuticals

In biopharma, GC is commonly used to examine drug degradation products, helping scientists track a drug’s pathway in the body. Especially when coupled with mass spectrometry (GC-MS), it provides precise qualitative and quantitative data on metabolites—essential for active substance development.

HPLC plays a central role in characterizing and purifying complex biomolecules like proteins. Thanks to its high resolution and sensitivity, it is ideal for analyzing large, polar molecules found in modern pharmaceuticals.

Environmental Analysis

In environmental monitoring, GC is used to detect organic pollutants in air and wastewater. It is applied, for example, in wastewater treatment plants to detect volatile organic compounds (VOCs). With specialized columns and sensitive detectors like MS, GC can precisely identify harmful substances like benzene or chlorinated hydrocarbons.

HPLC is primarily used to monitor water quality. It is ideal for detecting non-volatile substances such as pharmaceutical residues, pesticides, or cosmetic ingredients. By using customized stationary phases and highly sensitive detectors, HPLC enables both identification and accurate quantification—crucial for assessing water purity and developing effective protective measures.

Costs and Availability

GC and HPLC differ significantly in handling, cost, and applicability.
GC is considered more cost-effective and simpler to operate but is primarily suitable for volatile and thermally stable compounds with lower sample requirements.
HPLC, while more complex and expensive in terms of acquisition and maintenance, offers greater flexibility for analyzing various types of compounds.

GC is preferred in environmental analysis due to its high sensitivity to volatile pollutants, while HPLC is indispensable in biopharmaceuticals and food analytics. The choice between the two methods depends on the application, sample properties, and analytical requirements.

Use of HPLC and GC at Tentamus

Tentamus Group laboratories use both High-Performance Liquid Chromatography (HPLC) and Gas Chromatography (GC) for a broad range of analyses across food, cosmetics, pharmaceuticals, and dietary supplements.

HPLC is used to precisely separate, identify, and quantify compounds like sweeteners, pesticide residues, preservatives, and pharmaceutical ingredients.
GC is primarily used for analyzing solvent residues and pesticides, such as detecting contaminants in food, cosmetics, and pharmaceuticals.

Both methods help ensure regulatory compliance, maintain product quality, and support marketability. They are used complementarily, and for complex analyses, both systems may be employed together.

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